EnhancerDB
  1. Home
  2. SNP
  3. rs6661549[chr1:9471981]
Enhancers that have rs6661549[chr1:9471981]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9468594 9481767 enh11485
Bone Marrow (K562) Astrocyte Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs6661549[chr1:9471981]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9471971 9471986 ZIC3 JASPAR yes 26647298
chr1 9471971 9471986 ZIC4 JASPAR yes 26647299
chr1 9471972 9471986 GLIS2 JASPAR yes 26647300
chr1 9471972 9471986 GLIS3 JASPAR yes 26647301
chr1 9471972 9471986 ZIC1 JASPAR yes 26647302
chr1 9471976 9471986 ZNF740 JASPAR yes 26647304
Genes associated with rs6661549[chr1:9471981], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More