EnhancerDB
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  3. rs6668395[chr1:221997604]
Enhancers that have rs6668395[chr1:221997604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 221997414 221997699 vista5224
VISTA
Transcript factors that have rs6668395[chr1:221997604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 221997405 221997775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21382800
chr1 221997405 221997775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107872197
chr1 221997471 221997881 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107872198
chr1 221997585 221997821 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21382802
chr1 221997585 221997821 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107872200
chr1 221997601 221997606 TFAP2A TRANSFAC yes 35571656
chr1 221997601 221997606 TFAP2A TRANSFAC yes 118464840
chr1 221997601 221997607 MZF1 JASPAR yes 35571657
chr1 221997601 221997607 MZF1 JASPAR yes 118464841
chr1 221997602 221997612 NFKB1 JASPAR yes 35571658
chr1 221997602 221997612 REL JASPAR yes 35571659
chr1 221997602 221997612 NFKB1 JASPAR yes 118464842
chr1 221997602 221997612 REL JASPAR yes 118464843
chr1 221997602 221997613 NFKB1 JASPAR yes 35571660
chr1 221997602 221997613 NFKB1 JASPAR yes 118464844
Genes associated with rs6668395[chr1:221997604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More