EnhancerDB
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  3. rs6669813[chr1:212664459]
Enhancers that have rs6669813[chr1:212664459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs6669813[chr1:212664459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212664160 212666123 ZNF274 GTRD no Bone Marrow (K562) 107868583
chr1 212664387 212666081 ZNF274 GTRD no Cervix (HeLa-S3) 21378915
chr1 212664387 212666081 ZNF274 GTRD no Cervix (HeLa-S3) 107868584
chr1 212664438 212665787 ZNF274 GTRD no Bone Marrow (K562) 107868585
chr1 212664444 212664459 TFAP2A JASPAR yes 35129835
chr1 212664444 212664459 TFAP2C JASPAR yes 35129836
chr1 212664447 212664459 TFAP2A JASPAR yes 35129837
chr1 212664447 212664459 TFAP2B JASPAR yes 35129838
chr1 212664447 212664459 TFAP2C JASPAR yes 35129839
chr1 212664447 212664462 TFAP2A JASPAR yes 35129840
chr1 212664451 212664466 NR2C2 JASPAR yes 35129842
chr1 212664452 212664466 PLAG1 JASPAR yes 35129843
Genes associated with rs6669813[chr1:212664459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More