EnhancerDB
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  3. rs6672700[chr1:23090518]
Enhancers that have rs6672700[chr1:23090518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23070013 23090842 enh119
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs6672700[chr1:23090518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23090512 23090525 NFKB2 JASPAR yes 27390254
chr1 23090513 23090518 GATA2 JASPAR yes 27390255
chr1 23090514 23090523 PITX3 JASPAR yes 27390256
chr1 23090514 23090524 GSC2 JASPAR yes 27390257
chr1 23090514 23090524 GSC JASPAR yes 27390258
chr1 23090515 23090523 RHOXF1 JASPAR yes 27390259
Genes associated with rs6672700[chr1:23090518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More