EnhancerDB
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  3. rs6679366[chr1:31976041]
Enhancers that have rs6679366[chr1:31976041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs6679366[chr1:31976041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31976034 31976042 TBX5 JASPAR yes 27935426
chr1 31976034 31976043 ZEB1 JASPAR yes 27935427
chr1 31976034 31976046 NHLH1 JASPAR yes 27935428
chr1 31976035 31976045 ID4 JASPAR yes 27935429
chr1 31976035 31976045 NHLH1 JASPAR yes 27935430
chr1 31976035 31976045 TCF3 JASPAR yes 27935431
chr1 31976035 31976045 TCF4 JASPAR yes 27935432
chr1 31976036 31976045 SNAI2 JASPAR yes 27935433
chr1 31976037 31976042 USF2 TRANSFAC yes 27935434
Genes associated with rs6679366[chr1:31976041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More