EnhancerDB
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  3. rs6679796[chr1:212402524]
Enhancers that have rs6679796[chr1:212402524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs6679796[chr1:212402524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212402007 212402782 ZNF274 GTRD no Cervix (HeLa-S3) 21378168
chr1 212402008 212402602 ZNF274 GTRD no Cervix (HeLa-S3) 21378169
chr1 212402144 212402700 ZNF274 GTRD no Cervix (HeLa-S3) 21378172
chr1 212402182 212402661 ZNF274 GTRD no Cervix (HeLa-S3) 21378177
chr1 212402217 212402625 TCF7L2 GTRD no Colon (HCT116) 21378182
chr1 212402288 212402543 ZNF274 GTRD no Liver (HepG2) 21378183
chr1 212402509 212402524 FOXP1 JASPAR yes 35112344
chr1 212402509 212402524 MEF2C JASPAR yes 35112345
chr1 212402511 212402526 FOXP1 JASPAR yes 35112348
Genes associated with rs6679796[chr1:212402524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More