EnhancerDB
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  3. rs6682230[chr1:11999556]
Enhancers that have rs6682230[chr1:11999556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 11996824 12003175 enh26533
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs6682230[chr1:11999556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 11999551 11999565 PLAG1 JASPAR yes 26792152
chr1 11999553 11999557 LFA1 TRANSFAC yes 26792153
chr1 11999554 11999564 ERG JASPAR yes 26792154
chr1 11999554 11999564 ETS1 JASPAR yes 26792155
chr1 11999554 11999564 ETV1 JASPAR yes 26792156
chr1 11999554 11999564 ETV3 JASPAR yes 26792157
chr1 11999554 11999564 ETV4 JASPAR yes 26792158
chr1 11999554 11999564 ETV5 JASPAR yes 26792159
chr1 11999554 11999564 FEV JASPAR yes 26792160
chr1 11999554 11999564 FLI1 JASPAR yes 26792161
chr1 11999555 11999564 ELK4 JASPAR yes 26792162
Genes associated with rs6682230[chr1:11999556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 11994262 12035595 + PLOD1 ENSG00000083444.12 11994262 0 Heart 0.0027444 163
chr1 11994262 12035595 + PLOD1 ENSG00000083444.12 11994262 0 Heart 0.291568 163