EnhancerDB
  1. Home
  2. SNP
  3. rs6684112[chr1:172866896]
Enhancers that have rs6684112[chr1:172866896]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs6684112[chr1:172866896]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172866779 172867319 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350397
chr1 172866896 172866908 PKNOX1 JASPAR yes 33162850
chr1 172866896 172866908 PKNOX2 JASPAR yes 33162851
chr1 172866896 172866908 TGIF1 JASPAR yes 33162852
chr1 172866896 172866908 TGIF2 JASPAR yes 33162853
Genes associated with rs6684112[chr1:172866896], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More