EnhancerDB
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  3. rs6684549[chr1:31982479]
Enhancers that have rs6684549[chr1:31982479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs6684549[chr1:31982479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31982463 31982479 RFX2 JASPAR yes 27936453
chr1 31982463 31982479 RFX3 JASPAR yes 27936454
chr1 31982463 31982479 RFX4 JASPAR yes 27936455
chr1 31982464 31982483 RFX2 JASPAR yes 27936456
Genes associated with rs6684549[chr1:31982479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More