EnhancerDB
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  3. rs6685072[chr1:180580337]
Enhancers that have rs6685072[chr1:180580337]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180576925 180587319 enh784
Bone Marrow (K562) Skin (Keratinocyte) Esophagus Astrocyte Liver Lung Placenta Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs6685072[chr1:180580337]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180579535 180580712 ZNF143 GTRD no Epithelial (MCF-7) 107847941
chr1 180579894 180580618 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354029
chr1 180579894 180580618 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847942
chr1 180579933 180580903 ZNF143 GTRD no Epithelial (MCF-7) 107847943
chr1 180579962 180580850 ZNF143 GTRD no Epithelial (MCF-7) 107847944
chr1 180580002 180580526 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354030
chr1 180580026 180580530 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354031
chr1 180580028 180580696 ZNF143 GTRD no Epithelial (MCF-7) 107847945
chr1 180580034 180580698 ZNF143 GTRD no Epithelial (MCF-7) 107847946
chr1 180580079 180580772 ZNF143 GTRD no Epithelial (MCF-7) 107847947
chr1 180580100 180580724 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354032
chr1 180580100 180580724 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847948
chr1 180580111 180580624 ZNF274 GTRD no Cervix (HeLa-S3) 107847949
chr1 180580111 180580794 ZNF143 GTRD no Epithelial (MCF-7) 107847950
chr1 180580130 180580686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354033
chr1 180580130 180580686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847951
chr1 180580146 180580783 ZNF274 GTRD no Cervix (HeLa-S3) 107847952
chr1 180580171 180580810 ZNF143 GTRD no Epithelial (MCF-7) 107847953
chr1 180580199 180580563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354034
chr1 180580199 180580563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847954
chr1 180580231 180580637 ZNF143 GTRD no Epithelial (MCF-7) 107847955
chr1 180580243 180580487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354035
chr1 180580245 180580616 ZNF274 GTRD no Liver (HepG2) 107847956
chr1 180580246 180580736 ZNF143 GTRD no Epithelial (MCF-7) 107847957
chr1 180580266 180580731 ZNF274 GTRD no Cervix (HeLa-S3) 107847958
chr1 180580292 180580589 TCF7L2 GTRD no Colon (HCT116) 107847959
chr1 180580302 180580681 ZNF143 GTRD no Epithelial (MCF-7) 107847960
chr1 180580314 180580765 ZNF143 GTRD no Epithelial (MCF-7) 107847961
chr1 180580322 180580872 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354036
chr1 180580322 180580872 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107847962
chr1 180580335 180580353 NR3C1 JASPAR yes 33531733
Genes associated with rs6685072[chr1:180580337], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More