EnhancerDB
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  3. rs6688039[chr1:9242473]
Enhancers that have rs6688039[chr1:9242473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9238005 9264802 enh26522
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs6688039[chr1:9242473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9242463 9242475 TFAP2A JASPAR yes 26626033
chr1 9242463 9242475 TFAP2B JASPAR yes 26626034
chr1 9242464 9242475 TFAP2A JASPAR yes 26626035
chr1 9242465 9242474 TFAP2A JASPAR yes 26626036
chr1 9242472 9242484 NHLH1 JASPAR yes 26626037
chr1 9242473 9242483 NHLH1 JASPAR yes 26626038
Genes associated with rs6688039[chr1:9242473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More