EnhancerDB
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  3. rs66894945[chr17:70421166]
Enhancers that have rs66894945[chr17:70421166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs66894945[chr17:70421166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784993
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290126
chr17 70421028 70421459 ZNF274 GTRD no Blood (GM12878) 21785089
chr17 70421091 70421775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785090
chr17 70421158 70421678 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785091
chr17 70421161 70421176 FOXP1 JASPAR yes 55786672
chr17 70421162 70421173 FOXP2 JASPAR yes 55786673
chr17 70421162 70421177 STAT2 JASPAR yes 55786674
Genes associated with rs66894945[chr17:70421166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More