EnhancerDB
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Enhancers that have rs6689870[chr1:52367193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs6689870[chr1:52367193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52367177 52367198 IRF1 JASPAR yes 28874775
chr1 52367178 52367193 FOXP1 JASPAR yes 28874776
chr1 52367178 52367199 IRF1 JASPAR yes 28874777
chr1 52367179 52367194 FOXP1 JASPAR yes 28874778
chr1 52367179 52367200 IRF1 JASPAR yes 28874779
chr1 52367180 52367195 FOXP1 JASPAR yes 28874780
chr1 52367180 52367201 IRF1 JASPAR yes 28874781
chr1 52367181 52367196 FOXP1 JASPAR yes 28874782
chr1 52367181 52367202 IRF1 JASPAR yes 28874783
chr1 52367182 52367197 FOXP1 JASPAR yes 28874784
chr1 52367182 52367203 IRF1 JASPAR yes 28874785
chr1 52367183 52367198 FOXP1 JASPAR yes 28874786
chr1 52367184 52367199 FOXP1 JASPAR yes 28874787
chr1 52367184 52367205 IRF1 JASPAR yes 28874788
chr1 52367185 52367200 FOXP1 JASPAR yes 28874789
chr1 52367186 52367201 FOXP1 JASPAR yes 28874790
Genes associated with rs6689870[chr1:52367193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More