EnhancerDB
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  3. rs6690362[chr1:209608020]
Enhancers that have rs6690362[chr1:209608020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6690362[chr1:209608020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209606804 209608167 AR GTRD no Prostate (PC-3) 21375468
chr1 209606804 209608167 AR GTRD no Prostate (PC-3) 107865828
chr1 209606914 209608339 ZNF274 GTRD no Blood (GM12878) 107865829
chr1 209606931 209608250 ZNF274 GTRD no Bone Marrow (K562) 21375469
chr1 209606931 209608250 ZNF274 GTRD no Bone Marrow (K562) 107865830
chr1 209607740 209608337 ZNF274 GTRD no Bone Marrow (K562) 21375476
chr1 209607773 209608455 ZNF274 GTRD no Bone Marrow (K562) 21375477
chr1 209607990 209608172 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21375478
chr1 209608017 209608028 SPDEF JASPAR yes 34975852
Genes associated with rs6690362[chr1:209608020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More