EnhancerDB
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  3. rs6690388[chr1:154774447]
Enhancers that have rs6690388[chr1:154774447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs6690388[chr1:154774447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154774434 154774450 SOX4 JASPAR yes 32311865
chr1 154774438 154774453 HNF4A JASPAR yes 32311866
chr1 154774439 154774454 HNF4G JASPAR yes 32311867
chr1 154774443 154774449 LEF1 TRANSFAC yes 32311868
chr1 154774443 154774449 SOX10 JASPAR yes 32311869
chr1 154774447 154774462 SCRT1 JASPAR yes 32311870
Genes associated with rs6690388[chr1:154774447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 155290687 155300905 + RUSC1 ENSG00000160753.11 155290687 516240 Uterus 0.482555 1338
chr1 153963235 153964626 + RPS27 ENSG00000177954.7 153963235 809821 Adrenal 0.23091 1291