EnhancerDB
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  3. rs66948740[chr6:35353423]
Enhancers that have rs66948740[chr6:35353423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35351436 35372635 enh23176
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs66948740[chr6:35353423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35353412 35353423 PROP1 JASPAR yes 101279570
chr6 35353418 35353433 MEF2C JASPAR yes 101279571
chr6 35353418 35353439 IRF1 JASPAR yes 101279572
chr6 35353420 35353435 FOXP1 JASPAR yes 101279573
chr6 35353421 35353436 FOXP1 JASPAR yes 101279574
chr6 35353422 35353428 TBP TRANSFAC yes 101279575
chr6 35353422 35353437 FOXP1 JASPAR yes 101279576
chr6 35353422 35353443 IRF1 JASPAR yes 101279577
chr6 35353423 35353438 FOXP1 JASPAR yes 101279578
chr6 35353423 35353444 IRF1 JASPAR yes 101279579
Genes associated with rs66948740[chr6:35353423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More