EnhancerDB
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  3. rs6703489[chr1:90422039]
Enhancers that have rs6703489[chr1:90422039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs6703489[chr1:90422039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90422028 90422049 IRF1 JASPAR yes 30638655
chr1 90422032 90422047 FOXP1 JASPAR yes 30638656
chr1 90422034 90422049 FOXP1 JASPAR yes 30638657
chr1 90422034 90422049 MEF2C JASPAR yes 30638658
chr1 90422034 90422055 IRF1 JASPAR yes 30638659
chr1 90422036 90422051 FOXP1 JASPAR yes 30638660
chr1 90422037 90422052 FOXP1 JASPAR yes 30638661
chr1 90422038 90422044 TBP TRANSFAC yes 30638662
Genes associated with rs6703489[chr1:90422039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More