EnhancerDB
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  3. rs6707594[chr2:219589800]
Enhancers that have rs6707594[chr2:219589800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 219577845 219590135 enh34275
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Lung Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6707594[chr2:219589800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 219589784 219589805 IRF1 JASPAR yes 81010410
chr2 219589788 219589800 IRF1 JASPAR yes 81010411
chr2 219589796 219589806 HOXA13 JASPAR yes 81010413
chr2 219589796 219589806 HOXB13 JASPAR yes 81010414
chr2 219589796 219589806 HOXD13 JASPAR yes 81010415
chr2 219589796 219589807 HOXA10 JASPAR yes 81010416
chr2 219589797 219589806 CDX1 JASPAR yes 81010417
chr2 219589797 219589808 CDX2 JASPAR yes 81010418
chr2 219589798 219589810 MEF2A JASPAR yes 81010419
chr2 219589798 219589810 MEF2B JASPAR yes 81010420
chr2 219589798 219589810 MEF2D JASPAR yes 81010421
Genes associated with rs6707594[chr2:219589800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More