EnhancerDB
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  3. rs6712628[chr2:28582234]
Enhancers that have rs6712628[chr2:28582234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr2 28582195 28582710 vista30824
VISTA
Transcript factors that have rs6712628[chr2:28582234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28582091 28582429 JUND UCSC Txn Factor no Conserved 108431599
chr2 28582129 28582515 RUNX3 UCSC Txn Factor no Conserved 108431600
chr2 28582132 28582743 MAX UCSC Txn Factor no Conserved 108431601
chr2 28582147 28582403 ATF1 UCSC Txn Factor no Conserved 108431602
chr2 28582221 28582239 NR3C1 JASPAR yes 22024470
chr2 28582221 28582239 NR3C1 JASPAR yes 72641620
Genes associated with rs6712628[chr2:28582234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More