EnhancerDB
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  3. rs6716421[chr2:235194575]
Enhancers that have rs6716421[chr2:235194575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs6716421[chr2:235194575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235194561 235194577 POU4F2 JASPAR yes 81862245
chr2 235194561 235194577 POU4F3 JASPAR yes 81862246
chr2 235194563 235194577 POU4F1 JASPAR yes 81862248
chr2 235194563 235194578 HNF1A JASPAR yes 81862249
chr2 235194564 235194578 POU4F1 JASPAR yes 81862250
chr2 235194564 235194580 POU4F2 JASPAR yes 81862251
chr2 235194564 235194580 POU4F3 JASPAR yes 81862252
chr2 235194567 235194577 HESX1 JASPAR yes 81862253
chr2 235194567 235194577 RAX JASPAR yes 81862254
chr2 235194568 235194576 ISX JASPAR yes 81862255
chr2 235194568 235194576 LHX9 JASPAR yes 81862256
chr2 235194568 235194576 LMX1B JASPAR yes 81862257
chr2 235194568 235194576 PRRX1 JASPAR yes 81862258
chr2 235194568 235194576 RAX2 JASPAR yes 81862259
chr2 235194568 235194576 SHOX JASPAR yes 81862260
chr2 235194568 235194576 UNCX JASPAR yes 81862261
chr2 235194568 235194582 ONECUT1 JASPAR yes 81862262
chr2 235194568 235194582 ONECUT2 JASPAR yes 81862263
chr2 235194568 235194582 ONECUT3 JASPAR yes 81862264
chr2 235194569 235194579 CUX1 JASPAR yes 81862265
chr2 235194569 235194579 CUX2 JASPAR yes 81862266
chr2 235194569 235194579 PAX3 JASPAR yes 81862267
chr2 235194569 235194579 PAX7 JASPAR yes 81862268
chr2 235194572 235194588 POU4F2 JASPAR yes 81862269
chr2 235194572 235194588 POU4F3 JASPAR yes 81862270
chr2 235194574 235194588 POU4F1 JASPAR yes 81862271
chr2 235194575 235194587 HNF1B JASPAR yes 81862272
Genes associated with rs6716421[chr2:235194575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More