EnhancerDB
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  3. rs6720823[chr2:236405396]
Enhancers that have rs6720823[chr2:236405396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6720823[chr2:236405396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236405375 236405396 IRF1 JASPAR yes 81974236
chr2 236405384 236405398 STAT1 JASPAR yes 81974242
chr2 236405388 236405403 PRDM1 JASPAR yes 81974244
Genes associated with rs6720823[chr2:236405396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More