EnhancerDB
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  3. rs6728307[chr2:69056675]
Enhancers that have rs6728307[chr2:69056675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69053005 69068635 enh5634
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 69056301 69056845 vista31934
VISTA
Transcript factors that have rs6728307[chr2:69056675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69056137 69057169 POLR2A UCSC Txn Factor no Conserved 108432850
chr2 69056381 69056777 MAX UCSC Txn Factor no Conserved 108432851
chr2 69056420 69056716 BHLHE40 UCSC Txn Factor no Conserved 108432854
chr2 69056468 69056716 USF1 UCSC Txn Factor no Conserved 108432856
chr2 69056475 69056745 USF2 UCSC Txn Factor no Conserved 108432857
chr2 69056665 69056680 LEF1 JASPAR yes 22077029
chr2 69056665 69056680 LEF1 JASPAR yes 74801109
chr2 69056666 69056680 TCF7L2 JASPAR yes 22077030
chr2 69056666 69056680 TCF7L2 JASPAR yes 74801110
Genes associated with rs6728307[chr2:69056675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More