EnhancerDB
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  3. rs675320[chr1:55328148]
Enhancers that have rs675320[chr1:55328148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs675320[chr1:55328148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55328143 55328154 ELK4 JASPAR yes 29002158
chr1 55328143 55328156 ELF3 JASPAR yes 29002159
chr1 55328144 55328154 GABPA JASPAR yes 29002160
chr1 55328144 55328155 ELF5 JASPAR yes 29002161
chr1 55328144 55328155 SPDEF JASPAR yes 29002162
chr1 55328144 55328156 EHF JASPAR yes 29002163
chr1 55328144 55328156 ELF1 JASPAR yes 29002164
chr1 55328144 55328156 ELF4 JASPAR yes 29002165
chr1 55328145 55328154 ELK4 JASPAR yes 29002166
chr1 55328146 55328152 ETS1 JASPAR yes 29002167
chr1 55328146 55328152 SPI1 JASPAR yes 29002168
Genes associated with rs675320[chr1:55328148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More