EnhancerDB
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  3. rs677001[chr18:51777246]
Enhancers that have rs677001[chr18:51777246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs677001[chr18:51777246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51776844 51777398 ZNF274 GTRD no Blood (GM12878) 21822882
chr18 51777137 51777727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822883
chr18 51777163 51777759 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822884
chr18 51777173 51777833 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822885
chr18 51777198 51777634 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822886
chr18 51777214 51777662 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822887
chr18 51777234 51777750 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822888
chr18 51777238 51777648 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822889
chr18 51777239 51777253 NR2F1 JASPAR yes 110711461
Genes associated with rs677001[chr18:51777246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More