EnhancerDB
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  3. rs6780931[chr3:58460559]
Enhancers that have rs6780931[chr3:58460559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58452985 58463300 enh7254
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6780931[chr3:58460559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58460548 58460559 HOXC13 JASPAR yes 2699078
chr3 58460552 58460564 PKNOX1 JASPAR yes 2699079
chr3 58460552 58460564 PKNOX2 JASPAR yes 2699080
chr3 58460552 58460564 TGIF1 JASPAR yes 2699081
chr3 58460553 58460563 FIGLA JASPAR yes 2699082
chr3 58460553 58460563 ID4 JASPAR yes 2699083
chr3 58460553 58460563 MSC JASPAR yes 2699084
chr3 58460553 58460563 TCF3 JASPAR yes 2699085
chr3 58460553 58460563 TCF4 JASPAR yes 2699086
chr3 58460554 58460573 REST JASPAR yes 2699087
chr3 58460555 58460566 TBX2 JASPAR yes 2699088
chr3 58460556 58460564 TBX15 JASPAR yes 2699089
chr3 58460556 58460564 TBX1 JASPAR yes 2699090
chr3 58460556 58460564 TBX4 JASPAR yes 2699091
chr3 58460556 58460564 TBX5 JASPAR yes 2699092
chr3 58460556 58460566 TBR1 JASPAR yes 2699093
Genes associated with rs6780931[chr3:58460559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More