EnhancerDB
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  3. rs67828368[chr12:110546298]
Enhancers that have rs67828368[chr12:110546298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs67828368[chr12:110546298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110545004 110547622 AR GTRD no Prostate (PC-3) 21572511
chr12 110545095 110547649 ZNF143 GTRD no Epithelial (MCF-7) 21572513
chr12 110545236 110547233 ZBTB33 GTRD no Lung (A549) 21572516
chr12 110545875 110547084 TEF1 GTRD no Bone (Osteoblast) 21572547
chr12 110546104 110547032 ZNF143 GTRD no Epithelial (MCF-7) 21572548
chr12 110546141 110546913 ZBTB33 GTRD no Lung (A549) 21572549
chr12 110546157 110546441 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572550
chr12 110546183 110546976 ZNF274 GTRD no Cervix (HeLa-S3) 21572551
chr12 110546207 110547506 ZNF143 GTRD no Epithelial (MCF-7) 21572552
chr12 110546208 110547499 ZNF143 GTRD no Epithelial (MCF-7) 21572553
chr12 110546213 110546817 ZBTB33 GTRD no Lung (A549) 21572554
chr12 110546217 110546984 ZNF274 GTRD no Cervix (HeLa-S3) 21572555
chr12 110546244 110547054 ZNF143 GTRD no Epithelial (MCF-7) 21572556
chr12 110546258 110546913 ZNF274 GTRD no Cervix (HeLa-S3) 21572557
chr12 110546263 110546894 ZNF143 GTRD no Epithelial (MCF-7) 21572558
chr12 110546266 110546824 ZNF274 GTRD no Bone Marrow (K562) 21572559
chr12 110546274 110546809 ZBTB33 GTRD no Lung (A549) 21572560
chr12 110546278 110546716 ZNF143 GTRD no Epithelial (MCF-7) 21572561
chr12 110546282 110546964 ZNF274 GTRD no Cervix (HeLa-S3) 21572562
chr12 110546283 110546304 ZNF263 JASPAR yes 123676688
chr12 110546289 110546822 ZNF143 GTRD no Epithelial (MCF-7) 21572563
chr12 110546291 110546302 CEBPB JASPAR yes 123676690
chr12 110546291 110546304 ATF4 JASPAR yes 123676691
chr12 110546292 110546300 FEV JASPAR yes 123676692
chr12 110546292 110546305 JUN JASPAR yes 123676693
chr12 110546292 110546677 TEF1 GTRD no Bone (Osteoblast) 21572564
Genes associated with rs67828368[chr12:110546298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 110906169 110928190 + FAM216A ENSG00000204856.7 110906169 359871 Heart 0.00740044 12528