EnhancerDB
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Enhancers that have rs68178[chr1:118198162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs68178[chr1:118198162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118197638 118198208 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21334585
chr1 118197638 118198208 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107825328
chr1 118197708 118198164 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334589
chr1 118197708 118198164 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825332
chr1 118197720 118198407 GATA1 UCSC Txn Factor no Conserved 107825333
chr1 118197823 118198179 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334602
chr1 118197823 118198179 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825348
chr1 118197837 118198197 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334604
chr1 118197837 118198197 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825350
chr1 118198117 118198381 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334605
Genes associated with rs68178[chr1:118198162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More