EnhancerDB
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  3. rs6828108[chr4:89098541]
Enhancers that have rs6828108[chr4:89098541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89096939 89101889 enh21675
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6828108[chr4:89098541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89098529 89098550 IRF1 JASPAR yes 91155434
chr4 89098535 89098556 IRF1 JASPAR yes 91155435
chr4 89098536 89098551 FOXP1 JASPAR yes 91155436
chr4 89098539 89098545 TBP TRANSFAC yes 91155437
Genes associated with rs6828108[chr4:89098541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More