EnhancerDB
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  3. rs6840196[chr4:1188187]
Enhancers that have rs6840196[chr4:1188187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 1176165 1188755 enh21304
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Prostate (RWPE1) Lung Heart
Transcript factors that have rs6840196[chr4:1188187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 1188179 1188191 TFAP2A JASPAR yes 87800152
chr4 1188179 1188192 TFAP2A JASPAR yes 87800153
chr4 1188179 1188192 TFAP2B JASPAR yes 87800154
chr4 1188179 1188192 TFAP2C JASPAR yes 87800155
chr4 1188179 1188193 EBF1 JASPAR yes 87800156
chr4 1188180 1188189 TFAP2A JASPAR yes 87800157
Genes associated with rs6840196[chr4:1188187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More