EnhancerDB
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  3. rs6871197[chr5:78267797]
Enhancers that have rs6871197[chr5:78267797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs6871197[chr5:78267797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78267791 78267803 PKNOX2 JASPAR yes 63635985
chr5 78267797 78267801 NFE TRANSFAC yes 63635986
chr5 78267797 78267802 GATA1 TRANSFAC yes 63635987
chr5 78267797 78267803 GATA3 JASPAR yes 63635988
Genes associated with rs6871197[chr5:78267797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More