EnhancerDB
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  3. rs6878620[chr5:171571754]
Enhancers that have rs6878620[chr5:171571754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs6878620[chr5:171571754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171571752 171571763 ESRRA JASPAR yes 67767452
chr5 171571752 171571763 ESRRB JASPAR yes 67767453
chr5 171571753 171571761 NR4A2 JASPAR yes 67767454
chr5 171571754 171571764 RORA JASPAR yes 67767455
Genes associated with rs6878620[chr5:171571754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More