EnhancerDB
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  3. rs6893600[chr5:171857419]
Enhancers that have rs6893600[chr5:171857419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6893600[chr5:171857419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171857410 171857425 TFAP2A JASPAR yes 67789055
chr5 171857410 171857425 TFAP2C JASPAR yes 67789056
chr5 171857411 171857422 TFAP2A JASPAR yes 67789057
chr5 171857411 171857422 TFAP2B JASPAR yes 67789058
chr5 171857411 171857422 TFAP2C JASPAR yes 67789059
chr5 171857412 171857421 TFAP2A JASPAR yes 67789060
chr5 171857417 171857421 LFA1 TRANSFAC yes 67789061
Genes associated with rs6893600[chr5:171857419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More