EnhancerDB
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  3. rs6906513[chr6:41673067]
Enhancers that have rs6906513[chr6:41673067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6906513[chr6:41673067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41673053 41673072 CTCF JASPAR yes 101666995
chr6 41673065 41673074 NFIX JASPAR yes 101666998
chr6 41673066 41673072 NFIC JASPAR yes 101666999
chr6 41673066 41673080 TLX1 JASPAR yes 101667000
chr6 41673067 41673081 TLX1 JASPAR yes 101667001
Genes associated with rs6906513[chr6:41673067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More