EnhancerDB
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  3. rs71062936[chr2:225386787]
Enhancers that have rs71062936[chr2:225386787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
Transcript factors that have rs71062936[chr2:225386787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225386774 225386790 POU4F2 JASPAR yes 81337258
chr2 225386774 225386790 POU4F3 JASPAR yes 81337259
chr2 225386776 225386790 POU4F1 JASPAR yes 81337261
chr2 225386777 225386792 MEF2A JASPAR yes 81337262
chr2 225386778 225386790 MEF2A JASPAR yes 81337263
chr2 225386781 225386802 IRF1 JASPAR yes 81337264
chr2 225386782 225386803 IRF1 JASPAR yes 81337265
chr2 225386784 225386799 FOXP1 JASPAR yes 81337266
chr2 225386785 225386800 FOXP1 JASPAR yes 81337267
chr2 225386786 225386792 TBP TRANSFAC yes 81337268
chr2 225386786 225386801 FOXP1 JASPAR yes 81337269
chr2 225386787 225386802 FOXP1 JASPAR yes 81337270
chr2 225386787 225386808 IRF1 JASPAR yes 81337271
Genes associated with rs71062936[chr2:225386787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More