EnhancerDB
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  3. rs71172798[chr19:6245268]
Enhancers that have rs71172798[chr19:6245268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6230503 6255735 enh4983
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs71172798[chr19:6245268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6245250 6245271 IRF1 JASPAR yes 112263626
chr19 6245250 6245271 ZNF263 JASPAR yes 112263627
chr19 6245252 6245273 IRF1 JASPAR yes 112263630
chr19 6245254 6245275 IRF1 JASPAR yes 112263631
chr19 6245258 6245279 IRF1 JASPAR yes 112263632
chr19 6245260 6245275 PRDM1 JASPAR yes 112263633
chr19 6245260 6245275 STAT2 JASPAR yes 112263634
chr19 6245261 6245275 SPIC JASPAR yes 112263635
chr19 6245261 6245275 STAT1 JASPAR yes 112263636
chr19 6245262 6245283 IRF1 JASPAR yes 112263637
chr19 6245263 6245278 FOXP1 JASPAR yes 112263638
chr19 6245263 6245284 IRF1 JASPAR yes 112263639
chr19 6245265 6245280 FOXP1 JASPAR yes 112263640
chr19 6245267 6245282 FOXP1 JASPAR yes 112263641
chr19 6245268 6245283 FOXP1 JASPAR yes 112263642
Genes associated with rs71172798[chr19:6245268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More