EnhancerDB
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  3. rs71357605[chr18:56238675]
Enhancers that have rs71357605[chr18:56238675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71357605[chr18:56238675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56238654 56238675 IRF1 JASPAR yes 110961002
chr18 56238658 56238679 IRF1 JASPAR yes 110961005
chr18 56238659 56238680 IRF1 JASPAR yes 110961007
chr18 56238660 56238675 FOXP1 JASPAR yes 110961008
chr18 56238660 56238681 IRF1 JASPAR yes 110961009
chr18 56238661 56238676 FOXP1 JASPAR yes 110961010
chr18 56238661 56238682 IRF1 JASPAR yes 110961011
chr18 56238662 56238677 FOXP1 JASPAR yes 110961012
chr18 56238664 56238679 FOXP1 JASPAR yes 110961013
chr18 56238675 56238689 RXRG JASPAR yes 110961014
Genes associated with rs71357605[chr18:56238675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More