EnhancerDB
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  3. rs71402734[chr2:238815359]
Enhancers that have rs71402734[chr2:238815359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71402734[chr2:238815359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238815353 238815374 IRF1 JASPAR yes 82145831
chr2 238815354 238815375 IRF1 JASPAR yes 82145832
chr2 238815355 238815376 IRF1 JASPAR yes 82145833
chr2 238815356 238815371 FOXP1 JASPAR yes 82145834
chr2 238815356 238815377 IRF1 JASPAR yes 82145835
chr2 238815357 238815378 IRF1 JASPAR yes 82145836
chr2 238815358 238815373 FOXP1 JASPAR yes 82145837
chr2 238815358 238815379 IRF1 JASPAR yes 82145838
chr2 238815359 238815374 FOXP1 JASPAR yes 82145839
chr2 238815359 238815380 IRF1 JASPAR yes 82145840
Genes associated with rs71402734[chr2:238815359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More