EnhancerDB
  1. Home
  2. SNP
  3. rs71579310[chr1:44233495]
Enhancers that have rs71579310[chr1:44233495]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 44221165 44237481 enh300
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs71579310[chr1:44233495]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44233488 44233498 ALX3 JASPAR yes 28516802
chr1 44233488 44233498 GSX2 JASPAR yes 28516803
chr1 44233488 44233498 MNX1 JASPAR yes 28516804
chr1 44233488 44233499 HOXA10 JASPAR yes 28516805
chr1 44233489 44233497 LMX1A JASPAR yes 28516806
chr1 44233489 44233497 LMX1B JASPAR yes 28516807
chr1 44233489 44233497 NKX6-1 JASPAR yes 28516808
chr1 44233489 44233497 NKX6-2 JASPAR yes 28516809
chr1 44233489 44233497 VAX1 JASPAR yes 28516810
chr1 44233489 44233497 VAX2 JASPAR yes 28516811
chr1 44233489 44233497 VSX1 JASPAR yes 28516812
chr1 44233489 44233497 VSX2 JASPAR yes 28516813
chr1 44233490 44233511 IRF1 JASPAR yes 28516814
chr1 44233492 44233507 FOXP1 JASPAR yes 28516815
chr1 44233493 44233508 FOXP1 JASPAR yes 28516816
chr1 44233493 44233514 IRF1 JASPAR yes 28516817
chr1 44233494 44233500 TBP TRANSFAC yes 28516818
chr1 44233494 44233509 FOXP1 JASPAR yes 28516819
Genes associated with rs71579310[chr1:44233495], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More