EnhancerDB
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  3. rs71642215[chr1:28183281]
Enhancers that have rs71642215[chr1:28183281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28182518 28193279 enh179
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs71642215[chr1:28183281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28183021 28183297 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21325305
chr1 28183271 28183286 ZIC3 JASPAR yes 27727518
chr1 28183271 28183286 ZIC4 JASPAR yes 27727519
chr1 28183272 28183286 GLIS2 JASPAR yes 27727520
chr1 28183272 28183286 GLIS3 JASPAR yes 27727521
chr1 28183272 28183286 ZIC1 JASPAR yes 27727522
chr1 28183273 28183285 TFAP2A JASPAR yes 27727523
chr1 28183273 28183285 TFAP2C JASPAR yes 27727524
chr1 28183273 28183286 TFAP2A JASPAR yes 27727525
chr1 28183273 28183286 TFAP2B JASPAR yes 27727526
chr1 28183273 28183286 TFAP2C JASPAR yes 27727527
Genes associated with rs71642215[chr1:28183281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More