EnhancerDB
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  3. rs71654313[chr1:230213711]
Enhancers that have rs71654313[chr1:230213711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs71654313[chr1:230213711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230211239 230213783 ZNF274 GTRD no Blood (GM12878) 107878312
chr1 230211518 230213864 ZNF274 GTRD no Blood (GM12878) 107878313
chr1 230211713 230213752 ZNF274 GTRD no Blood (GM12878) 107878315
chr1 230211719 230213781 ZNF274 GTRD no Blood (GM12878) 107878316
chr1 230211801 230213790 ZNF274 GTRD no Blood (GM12878) 107878320
chr1 230211879 230213938 ZNF274 GTRD no Blood (GM12878) 107878321
chr1 230213707 230213712 ATF1 TRANSFAC yes 36018849
Genes associated with rs71654313[chr1:230213711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More