EnhancerDB
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  3. rs71771246[chr1:43942535]
Enhancers that have rs71771246[chr1:43942535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs71771246[chr1:43942535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43942516 43942537 ZNF263 JASPAR yes 28498498
chr1 43942521 43942542 IRF1 JASPAR yes 28498500
chr1 43942527 43942548 IRF1 JASPAR yes 28498501
chr1 43942529 43942544 STAT2 JASPAR yes 28498502
chr1 43942530 43942544 STAT1 JASPAR yes 28498503
chr1 43942531 43942546 IRF9 JASPAR yes 28498504
chr1 43942533 43942554 IRF1 JASPAR yes 28498505
chr1 43942534 43942549 FOXP1 JASPAR yes 28498506
chr1 43942535 43942546 FOXP2 JASPAR yes 28498507
chr1 43942535 43942550 STAT2 JASPAR yes 28498508
Genes associated with rs71771246[chr1:43942535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More