EnhancerDB
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  3. rs71924780[chr2:236412236]
Enhancers that have rs71924780[chr2:236412236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71924780[chr2:236412236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236412233 236412245 FOXI1 JASPAR yes 81975137
chr2 236412234 236412246 FOXC2 JASPAR yes 81975138
chr2 236412234 236412248 ONECUT3 JASPAR yes 81975139
chr2 236412235 236412246 FOXB1 JASPAR yes 81975140
chr2 236412235 236412246 FOXC1 JASPAR yes 81975141
chr2 236412235 236412251 POU4F2 JASPAR yes 81975142
chr2 236412235 236412251 POU4F3 JASPAR yes 81975143
chr2 236412236 236412240 YY1 TRANSFAC yes 81975144
chr2 236412236 236412251 FOXA1 JASPAR yes 81975145
Genes associated with rs71924780[chr2:236412236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More