EnhancerDB
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  3. rs7199187[chr16:28193660]
Enhancers that have rs7199187[chr16:28193660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs7199187[chr16:28193660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28193651 28193672 REST JASPAR yes 10219785
chr16 28193657 28193667 ESX1 JASPAR yes 10219786
chr16 28193657 28193667 GBX1 JASPAR yes 10219787
chr16 28193657 28193667 GSX1 JASPAR yes 10219788
chr16 28193657 28193667 GSX2 JASPAR yes 10219789
chr16 28193658 28193662 H1TF2 TRANSFAC yes 10219790
chr16 28193658 28193662 NFE TRANSFAC yes 10219791
chr16 28193658 28193662 SRF TRANSFAC yes 10219792
chr16 28193658 28193666 BSX JASPAR yes 10219793
chr16 28193658 28193666 DLX6 JASPAR yes 10219794
chr16 28193658 28193666 MSX1 JASPAR yes 10219795
chr16 28193658 28193666 MSX2 JASPAR yes 10219796
Genes associated with rs7199187[chr16:28193660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More