EnhancerDB
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  3. rs72022340[chr17:53518203]
Enhancers that have rs72022340[chr17:53518203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs72022340[chr17:53518203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53518198 53518218 RREB1 JASPAR yes 54851042
chr17 53518203 53518215 IRF1 JASPAR yes 54851043
chr17 53518203 53518223 RREB1 JASPAR yes 54851044
Genes associated with rs72022340[chr17:53518203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More