EnhancerDB
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Enhancers that have rs7203848[chr16:88264338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs7203848[chr16:88264338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88262863 88265383 TCF7L2 GTRD no Colon (HCT116) 21735442
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 21735446
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 108221839
chr16 88264025 88264500 ZNF143 GTRD no Epithelial (MCF-7) 21735451
chr16 88264028 88266217 TCF7L2 GTRD no Colon (HCT116) 21735452
chr16 88264234 88265530 ZNF143 GTRD no Epithelial (MCF-7) 21735454
chr16 88264321 88265992 ZNF274 GTRD no Cervix (HeLa-S3) 21735455
chr16 88264321 88266563 TCF7L2 GTRD no Colon (HCT116) 21735456
chr16 88264321 88266563 TCF7L2 GTRD no Colon (HCT116) 108221840
chr16 88264328 88264339 NFKB1 JASPAR yes 12268318
chr16 88264328 88264341 NFKB1 JASPAR yes 12268319
chr16 88264328 88264341 NFKB2 JASPAR yes 12268320
chr16 88264329 88264340 NFKB1 JASPAR yes 12268321
chr16 88264330 88264341 NFKB1 JASPAR yes 12268322
chr16 88264332 88264346 GLIS2 JASPAR yes 12268323
chr16 88264332 88264346 GLIS3 JASPAR yes 12268324
chr16 88264332 88264347 ZIC3 JASPAR yes 12268325
chr16 88264333 88264343 SP1 JASPAR yes 12268326
chr16 88264333 88264343 ZNF740 JASPAR yes 12268327
Genes associated with rs7203848[chr16:88264338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More