EnhancerDB
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  3. rs7205238[chr16:88299554]
Enhancers that have rs7205238[chr16:88299554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs7205238[chr16:88299554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88296991 88299886 P63 GTRD no Skin (Keratinocyte) 108221872
chr16 88298514 88300105 TCF7L2 GTRD no Colon (HCT116) 21735690
chr16 88298514 88300105 TCF7L2 GTRD no Colon (HCT116) 108221873
chr16 88298768 88299704 TCF7L2 GTRD no Colon (HCT116) 21735707
chr16 88298768 88299704 TCF7L2 GTRD no Colon (HCT116) 108221874
chr16 88298790 88300178 TCF7L2 GTRD no Colon (HCT116) 21735708
chr16 88298790 88300178 TCF7L2 GTRD no Colon (HCT116) 108221875
chr16 88298799 88300292 TCF7L2 GTRD no Colon (HCT116) 21735709
chr16 88298799 88300292 TCF7L2 GTRD no Colon (HCT116) 108221876
chr16 88298801 88300385 TCF7L2 GTRD no Colon (HCT116) 21735710
chr16 88298801 88300385 TCF7L2 GTRD no Colon (HCT116) 108221877
chr16 88298826 88300904 ZNF143 GTRD no Epithelial (MCF-7) 21735711
chr16 88298826 88300904 ZNF143 GTRD no Epithelial (MCF-7) 108221878
chr16 88298830 88299652 TCF7L2 GTRD no Colon (HCT116) 21735712
chr16 88298830 88299652 TCF7L2 GTRD no Colon (HCT116) 108221879
chr16 88298961 88299579 ZNF274 GTRD no Blood (GM12878) 108221881
chr16 88298982 88300156 TCF7L2 GTRD no Colon (HCT116) 21735715
chr16 88298982 88300156 TCF7L2 GTRD no Colon (HCT116) 108221883
chr16 88298993 88299830 P63 GTRD no Skin (Keratinocyte) 108221884
chr16 88299153 88300387 ZNF143 GTRD no Epithelial (MCF-7) 21735717
chr16 88299153 88300387 ZNF143 GTRD no Epithelial (MCF-7) 108221886
chr16 88299245 88300609 ZNF274 GTRD no Bone Marrow (K562) 108221887
chr16 88299398 88299636 ZBTB33 GTRD no Brain (SK-N-SH) 21735718
chr16 88299398 88299636 ZBTB33 GTRD no Brain (SK-N-SH) 108221888
chr16 88299415 88299664 ZNF274 GTRD no Blood (GM12878) 108221889
chr16 88299541 88299555 PLAG1 JASPAR yes 12271972
chr16 88299549 88299559 ZNF740 JASPAR yes 12271973
chr16 88299554 88299559 SP1 TRANSFAC yes 12271974
Genes associated with rs7205238[chr16:88299554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More