EnhancerDB
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  3. rs7213288[chr17:39827824]
Enhancers that have rs7213288[chr17:39827824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs7213288[chr17:39827824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39827554 39828791 ZNF274 GTRD no Blood (GM12878) 21758223
chr17 39827554 39828791 ZNF274 GTRD no Blood (GM12878) 108259464
chr17 39827811 39827825 TCF7L2 JASPAR yes 54271267
chr17 39827811 39827826 LEF1 JASPAR yes 54271268
chr17 39827816 39827831 FOXP1 JASPAR yes 54271269
chr17 39827817 39827828 FOXA1 JASPAR yes 54271270
chr17 39827818 39827830 FOXC2 JASPAR yes 54271271
chr17 39827819 39827830 FOXP2 JASPAR yes 54271272
chr17 39827823 39827829 HiNF-A TRANSFAC yes 54271273
chr17 39827823 39827833 MAX JASPAR yes 54271274
Genes associated with rs7213288[chr17:39827824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More