EnhancerDB
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  3. rs72171786[chr18:51919308]
Enhancers that have rs72171786[chr18:51919308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51910465 51921195 enh4845
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs72171786[chr18:51919308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51918938 51919318 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823041
chr18 51919302 51919308 NFIC JASPAR yes 110715368
chr18 51919303 51919315 BHLHE23 JASPAR yes 110715369
chr18 51919304 51919314 BHLHE22 JASPAR yes 110715370
chr18 51919304 51919314 NEUROD2 JASPAR yes 110715371
chr18 51919304 51919314 NEUROG2 JASPAR yes 110715372
chr18 51919304 51919314 OLIG1 JASPAR yes 110715373
chr18 51919304 51919314 OLIG2 JASPAR yes 110715374
chr18 51919304 51919314 OLIG3 JASPAR yes 110715375
Genes associated with rs72171786[chr18:51919308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More