EnhancerDB
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  3. rs7246406[chr19:4574271]
Enhancers that have rs7246406[chr19:4574271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs7246406[chr19:4574271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4573855 4576766 TCF7L2 GTRD no Colon (HCT116) 21841547
chr19 4573855 4576766 TCF7L2 GTRD no Colon (HCT116) 108372345
chr19 4574180 4576870 ZNF274 GTRD no Bone Marrow (K562) 108372346
chr19 4574269 4574279 GSC2 JASPAR yes 112174984
chr19 4574270 4574278 OTX1 JASPAR yes 112174985
chr19 4574270 4574278 OTX2 JASPAR yes 112174986
chr19 4574270 4574278 RHOXF1 JASPAR yes 112174987
chr19 4574270 4574279 PITX3 JASPAR yes 112174988
Genes associated with rs7246406[chr19:4574271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More