EnhancerDB
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  3. rs7252727[chr19:4584668]
Enhancers that have rs7252727[chr19:4584668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs7252727[chr19:4584668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4582725 4585372 TCF7L2 GTRD no Colon (HCT116) 21841759
chr19 4582725 4585372 TCF7L2 GTRD no Colon (HCT116) 108372558
chr19 4582821 4586491 ZNF274 GTRD no Liver (HepG2) 21841761
chr19 4582821 4586491 ZNF274 GTRD no Liver (HepG2) 108372559
chr19 4582834 4585283 ZNF274 GTRD no Liver (HepG2) 21841762
chr19 4582834 4585283 ZNF274 GTRD no Liver (HepG2) 108372560
chr19 4582848 4585382 ZNF274 GTRD no Liver (HepG2) 21841763
chr19 4582848 4585382 ZNF274 GTRD no Liver (HepG2) 108372561
chr19 4582861 4586033 ZNF274 GTRD no Liver (HepG2) 21841766
chr19 4582861 4586033 ZNF274 GTRD no Liver (HepG2) 108372562
chr19 4582873 4585285 ZNF274 GTRD no Liver (HepG2) 21841767
chr19 4582873 4585285 ZNF274 GTRD no Liver (HepG2) 108372563
chr19 4582899 4585538 ZNF274 GTRD no Liver (HepG2) 21841770
chr19 4582899 4585538 ZNF274 GTRD no Liver (HepG2) 108372564
chr19 4582943 4585441 ZNF274 GTRD no Liver (HepG2) 21841771
chr19 4582943 4585441 ZNF274 GTRD no Liver (HepG2) 108372565
chr19 4582949 4585412 ZNF274 GTRD no Liver (HepG2) 21841772
chr19 4582949 4585412 ZNF274 GTRD no Liver (HepG2) 108372566
chr19 4582960 4585350 TCF7L2 GTRD no Colon (HCT116) 21841775
chr19 4582960 4585350 TCF7L2 GTRD no Colon (HCT116) 108372567
chr19 4582971 4585111 ZBTB33 GTRD no Lung (A549) 108372568
chr19 4582971 4585413 ZNF274 GTRD no Liver (HepG2) 21841777
chr19 4582971 4585413 ZNF274 GTRD no Liver (HepG2) 108372569
chr19 4582990 4585302 TCF7L2 GTRD no Colon (HCT116) 21841778
chr19 4582990 4585302 TCF7L2 GTRD no Colon (HCT116) 108372570
chr19 4582994 4585386 ZNF274 GTRD no Liver (HepG2) 21841780
chr19 4582994 4585386 ZNF274 GTRD no Liver (HepG2) 108372571
chr19 4583053 4585323 TCF7L2 GTRD no Colon (HCT116) 21841784
chr19 4583053 4585323 TCF7L2 GTRD no Colon (HCT116) 108372572
chr19 4583055 4584975 ZNF274 GTRD no Liver (HepG2) 21841785
chr19 4583055 4584975 ZNF274 GTRD no Liver (HepG2) 108372573
chr19 4583058 4585350 TCF7L2 GTRD no Colon (HCT116) 21841786
chr19 4583058 4585350 TCF7L2 GTRD no Colon (HCT116) 108372574
chr19 4583089 4585333 TCF7L2 GTRD no Colon (HCT116) 21841789
chr19 4583089 4585333 TCF7L2 GTRD no Colon (HCT116) 108372575
chr19 4583128 4584680 ZNF274 GTRD no Liver (HepG2) 21841792
chr19 4583168 4585443 TCF7L2 GTRD no Colon (HCT116) 21841795
chr19 4583168 4585443 TCF7L2 GTRD no Colon (HCT116) 108372576
chr19 4583411 4586039 ZBTB33 GTRD no Lung (A549) 108372577
chr19 4583530 4586578 ZNF274 GTRD no Bone Marrow (K562) 108372578
chr19 4583604 4585943 ZNF274 GTRD no Bone Marrow (K562) 108372579
chr19 4583680 4585925 ZNF274 GTRD no Bone Marrow (K562) 108372580
chr19 4583714 4585240 ZNF274 GTRD no Liver (HepG2) 21841810
chr19 4583714 4585240 ZNF274 GTRD no Liver (HepG2) 108372581
chr19 4583716 4585195 TCF7L2 GTRD no Colon (HCT116) 21841811
chr19 4583716 4585195 TCF7L2 GTRD no Colon (HCT116) 108372582
chr19 4583728 4585663 ZNF274 GTRD no Liver (HepG2) 21841815
chr19 4583728 4585663 ZNF274 GTRD no Liver (HepG2) 108372583
chr19 4583743 4585354 TCF7L2 GTRD no Colon (HCT116) 21841818
chr19 4583743 4585354 TCF7L2 GTRD no Colon (HCT116) 108372584
chr19 4583787 4585323 TCF7L2 GTRD no Colon (HCT116) 21841821
chr19 4583787 4585323 TCF7L2 GTRD no Colon (HCT116) 108372585
chr19 4583808 4585245 TCF7L2 GTRD no Colon (HCT116) 21841823
chr19 4583808 4585245 TCF7L2 GTRD no Colon (HCT116) 108372586
chr19 4583871 4585398 ZNF274 GTRD no Bone Marrow (K562) 108372587
chr19 4583932 4585200 ZNF274 GTRD no Liver (HepG2) 21841835
chr19 4583932 4585200 ZNF274 GTRD no Liver (HepG2) 108372588
chr19 4583935 4585020 ZNF274 GTRD no Liver (HepG2) 21841836
chr19 4583935 4585020 ZNF274 GTRD no Liver (HepG2) 108372589
chr19 4583946 4585286 ZNF274 GTRD no Bone Marrow (K562) 108372590
chr19 4583965 4585405 ZNF274 GTRD no Bone Marrow (K562) 108372591
chr19 4583999 4586505 ZNF274 GTRD no Bone Marrow (K562) 108372592
chr19 4584017 4585177 ZBTB33 GTRD no Lung (A549) 108372593
chr19 4584029 4585521 ZNF274 GTRD no Bone Marrow (K562) 108372594
chr19 4584032 4586066 ZNF274 GTRD no Bone Marrow (K562) 108372595
chr19 4584057 4586033 ZNF274 GTRD no Bone Marrow (K562) 108372596
chr19 4584124 4585570 ZNF274 GTRD no Bone Marrow (K562) 108372597
chr19 4584189 4585329 ZNF274 GTRD no Bone Marrow (K562) 108372598
chr19 4584376 4584985 ZNF143 GTRD no Epithelial (MCF-7) 108372599
chr19 4584454 4585178 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108372600
chr19 4584509 4585351 ZNF274 GTRD no Liver (HepG2) 21841856
chr19 4584509 4585351 ZNF274 GTRD no Liver (HepG2) 108372601
chr19 4584555 4585413 ZNF274 GTRD no Bone Marrow (K562) 108372602
chr19 4584618 4584984 ZNF274 GTRD no Blood (GM12878) 108372603
chr19 4584627 4584947 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108372604
chr19 4584656 4584670 PLAG1 JASPAR yes 112176367
chr19 4584656 4584676 RREB1 JASPAR yes 112176368
chr19 4584661 4585090 ZNF143 GTRD no Epithelial (MCF-7) 108372605
chr19 4584662 4585265 ZNF274 GTRD no Bone Marrow (K562) 108372606
chr19 4584664 4584944 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108372607
chr19 4584668 4584674 SP1 TRANSFAC yes 112176369
chr19 4584668 4584678 SP1 JASPAR yes 112176370
Genes associated with rs7252727[chr19:4584668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 4444996 4457819 - UBXN6 ENSG00000167671.7 4457819 126849 Liver 0.206641 16842